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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126540690
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QADKEVLPNG MTKKMTHISK SEKSRQQSYD SVMDGDESNQ ISANVFEWTK QGNAAALEKN  60
   61 SRYLDTRDNI GASPLHYASA NGHFRIIRHI VQIVGHQELN VRDEEGNTPL HWAVQKDQPG 120
  121 SCSVLLSLGA DPNVLNNSHQ APIHMAVSLG KNFVLEQLVS HKQTDVNLEG DLGNTPVILS 180
  181 AALDNHEALG ILYKHGAKFC RQNNLGHFPI HAAAFSGAKK SMEVILLKGE EAGLSIDAHI 240
  241 NYVDKSCSSP LHLAVRGGNL DIIKLCIGYG AKIDQQQCDK STALHFACSQ GATEVVKIML 300
  301 SSYPKVCDLI NITDGANQTP LHKAVIFDHF ELSEYLMSQG ANIDFVDCKG HSPLLLATSC 360
  361 GAWRTVNLLL SHGADLTKKD KSGCNFLHLA ILQPRGLKNL PTEVLQHESV RELLNDEDIE 420
  421 GCTPLHYACR LGIPDSVKNM LGLEVSLDQK SKEKKSALHF AAEFGRINTC HRLLEMVTDT 480
  481 RLLNEGDEKG LTPLHLASRE GHVKVVELLL RKGALFHSDY RGWSGLHHAA SEGYTQTMDT 540
  541 LLTSNIKLLN KTDGDGNTAL HLAARAGHVA AVRLLLYRGA KIILNKNDAS FLHEAVHNAR 600
  601 REVTNMVIES DRCEEAMTTY KPNSTKRCIV MDMIEFLPES FKHLLDTCIR ESEEDVNCTN 660
  661 YYIEYNFRWL QHPLQNLKKT GMEKDMAYKP LSALNAMVNF NRVNLLTHPV CKKYLEMKWS 720
  721 AYGIKAHLLN MTVYALGVFP LTYLIVNLKP TLVTSRNVTS VNMVCTSLYK QSYLTTSSML 780
  781 LVLAMNMYAV GKEILQMFQQ RLNYLRDLSN YMDWAAAICA LLFVVPLLMN LKSSWHWQAG 840
  841 ALAALTSWLN LLLYLQRFER IGIYVVMFRE ISRTLLSIIV LFFYLILGFA LSFYALMIEQ 900
  901 QHFGRMFLSL LQTFVMMVGE MNYQDNFMKP YLQGDLPFPD LTLAIFVWFV LLVPILLMNL 960
  961 LIGLAVGDIA EVQTNACLKR IAMQIELHTN LEERLPYWFM KRVDQVTIRE YPNRCFSGKK1020
 1021 RWFFGGNEVK SRTRLGPTFH QLTPLERELT KQKYRLKEIS ETMEKQHNLL KLIVQKMEIS1080
 1081 SEADEHDGPP VFQELKEKLL TKSKWGPLLR AVTARKKGIC SFGKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle