YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|441473, gi\|10...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLLLLLTV SLAPTTEAGE IIGGHEAKPH SRPYMAYLQI MDEDSGSTMC GGFLIQEDFV  60
   61 LTAAHCLGSK ITVTLGAHNI KEQEKMQQVI PVVKIIPHPA YNSKKYSNDI MLLKLKSKAK 120
  121 RTRAVKTLSL PRSNFKVKPG DVCNVAGWGK LGPMGKFPDK LQEVELTVQE DQECETYFKK 180
  181 AYNKANQICA GDPKIKRASF GGDSGGPLVC KKVAAGIVAY GSKNGSAPEA FTKVSTFLSW 240
  241 IKETMKKS

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	248	0.99