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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MCP_RAT
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAAPLTPDP THPRRRRKSY TFFSLGIYAE ALLFLLSSLS DACEPPPPFE AMELKDKPKP  60
   61 HYAIGEIIEY TCKKGYLYLS PYPMTAICQP NHTWVPISDH GCIKVQCTML QDPSFGKVHY 120
  121 IDGRFSWGAR VKYTCMNGYY MVGMSVLQCE LNGNGDAFWN GHPPSCKKVY CLPPPKIKNG 180
  181 THTFTDIKVF KYHEAVIYSC DPNPGPDKFS LVGPSMLFCA GHNTWSSDPP ECKVVKCPFP 240
  241 VLQNGRQISR TEKKFSYQAL VLFQCLEGFY MEGSSMVVCG AKSSWEPSIP QCLKGPKPHS 300
  301 TKPPVYSESG YPSPREGIFG QEFDAWIIAL IVVTSVVGVI VICLIILRCS EYRKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle