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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13929084, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGVFLLGVL APAGLGISAL AKLQPKGSQC VGNECFALFQ DPVTFLDASQ ACQRLQGHLM  60
   61 TVRSSVAADV ISLLVSDSSM DSRPWIGLQL PQGCGDPVHL GPLRGFQWVT GDNHTSYSRW 120
  121 ARPNDQSPPL CGPLCVTVST ATEAAPGEPA WEEKPCENET KGFLCEFYFA AFCRPLRVNT 180
  181 RDPEGAHISS TYNTPLGVSG ADFQTLPIGS SATVAPFGLE LVCRALPGTS EGHWTREVTG 240
  241 AWNCSVENGG CEYMCNRSAN GPRCVCPSGG DLQADGRSCA KPVAQLCNEL CQHFCVNNSD 300
  301 VPGSYSCMCE TGYQLAADGH RCEDVDDCKQ GPNPCPQLCS NTEGGFECRC YDGYELVDGE 360
  361 CVEQLDPCFR SKCEYQCQPV NSTHYNCICA EGFAPKLDDP DRCEMFCNET SCPADCDPNS 420
  421 PSFCQCPEGF ILDEGSICTD IDECSQGECL TNECRNLPGS YECICGPDTA LAGQISKDCD 480
  481 PIPVLEDSED GGSGEHPSSN PTVVSSTVPP SARPMHSGVL IGISIASLSL VVALLALLCH 540
  541 LRKKQGTARA ELEYKCTSSA KEVVLQHVRT DRTLQKF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle