YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CD37_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAQESCLSL IKYFLFVFNL FFFVLGGLIF CFGTWILIDK TSFVSFVGLS FVPLQTWSKV  60
   61 LSVSGVLTMA LALLGCVGAL KELRCLLGLY FGMLLLLFAT QITLGILIST QRVRLERRVQ 120
  121 ELVLRTIQSY RTNPDETAAE ESWDYAQFQL RCCGWQSPRD WNKAQMLKAN GSEELFVPCS 180
  181 CYNSTATNDS SGFDKLFLSQ LSRLGPRAKL RQTADICALP AKAHIYREGC ARSLQKWLHN 240
  241 NIISIVGICL GVGLLELGFM TLSIFLCRNL DHVYDRLARY R

Type	Start	End	Confidence
Cytoplasmic	1	13	0.83
Transmembrane Helix	14	38	0.90
Non-Cytoplasmic	39	56	0.82
Transmembrane Helix	57	79	0.89
Cytoplasmic	80	85	0.76
Transmembrane Helix	86	108	0.92
Non-Cytoplasmic	109	241	0.84
Transmembrane Helix	242	266	0.80
Cytoplasmic	267	281	0.70