YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ILRL2_RAT
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.89
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGMPPLLFCW VSFVLPLFVA AGNCTDVYMH HEMISEGQPF PFNCTYPPVT NGAVNLTWHR  60
   61 TPSKSPISIN RHVRIHQDQS WILFLPLALE DSGIYQCVIK DAHSCYRIAI NLTVFRKHWC 120
  121 DSSNEESSIN SSDEYQQWLP IGKSGSLTCH LYFPESCVLD SIKWYKGCEE IKVSKKFCPT 180
  181 GTKLLVNNID VEDSGSYACS ARLTHLGRIF TVRNYIAVNT KEVGSGGRIP NITYPKNNSI 240
  241 EVQLGSTLIV DCNITDTKEN TNLRCWRVNN TLVDDYYNDF KRIQEGIETN LSLRNHILYT 300
  301 VNITFLEVKM EDYGHPFTCH AAVSAAYIIL KRPAPDFRAY LIGGLMAFLL LAVSILYIYN 360
  361 TFKVDIVLWY RSTFHTAQAP DDEKLYDAYV LYPKYPRESQ GHDVDTLVLK ILPEVLEKQC 420
  421 GYKLFIFGRD EFPGQAVASV IDENIKLCRR LMVLVAPETS SFSFLKNLTE EQIAVYNALV 480
  481 QDGMKVILIE LERVKDYSTM PESIQYIRQK HGAIQWDGDF TEQAQCAKTK FWKKVRYHMP 540
  541 PRRYPASPPV QLLGHTPRIP G

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	338	0.96
Transmembrane Helix	339	361	0.84
Cytoplasmic	362	561	0.64