YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149059092, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPNFKLQCH FTLILLTALR GESRYLEVQE AAVYDPFLLF SANLKRNLAE EQPYRRALRC  60
   61 LDMLSLPGQF TFTADQPQLH CAAFFIGEPE EFITIHFDLV SIDCQGGDFL KVFDGWILKG 120
  121 EKFPSSQDHP LPTRERYTDF CESGLTRRSV TSSQNVAMVF FRVHEPGNGF TITIKTDPNL 180
  181 FPCNIISQTP SGRFTLVVPY QHQNCSFSII YPVTIKISDL ALGHLHGLQL KKPAAGCGGT 240
  241 GDFVELLGGT GLDTSKMMLL VDLCYPFHGP AQMKISCDNA VVRMVSSGKH MNRVTFEYRQ 300
  301 LEPLELETST RNSIPEYCLS SL

Type	Start	End	Confidence
Signal Peptide	1	21	0.88
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	322	0.99