YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22775474
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRSRCVSR AFSAPLSAFQ KGNCPLGRRS LPGVSLCQGP GYPDSRKMVI NTVAVFSVRF  60
   61 FQTTAVCKND VITVQTPAFA ESVTEGDVRW EKAVGDAVAE DEVVCEIETD KTSVQVPSPA 120
  121 NGIIEALLVP DGGKVEGGTP LFTLRKTGAA PAKAKPAEAP ATAHKAAPEA PAAPPPPVAP 180
  181 VPTQMPPVPS PSQPPSSKPV SAIKPTAAPP LAEAGAAKGL RSEHREKMNR MRQRIAQRLK 240
  241 EAQNTCAMLT TFNEVDMSNI QEMRARHKDA FLKKHNLKLG LMSAFVKASA FALQEQPVVN 300
  301 AVIDDATKEV VYRDYIDISV AVATPRGLVV PVIRNVETMN YADIERTINE LGEKARKNEL 360
  361 AIEDMDGGTF TISNGGVFGS LFGTPIINPP QSAILGMHGI FDRPVAVGGK VEVRPMMYVA 420
  421 LTYDHRLIDG REAVTFPPKI KAAVEDPAVL LLDL

Type	Start	End	Confidence
Signal Peptide	1	18	0.58
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	454	0.99