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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: iHog-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLLTSSLLL FSLLTSRLEA IPVLEKSPAH PAHSAHPAHP AHPAHPAHPS PGVRILRAPE  60
   61 SLVAPLGDEV VLECETSLQP ERFEWSHRSS RSPGAGFKYL KTGTAKANVS QEAAISRLRV 120
  121 LVRPDTLGEY RCVGWFGPLV VTSTIARLEL ASTSLVDAQE SESPLQWRVS AGNSVLWSCG 180
  181 QQVQSNPSAS WSYYRNGVEI KPEFIGTNGN LFLSNVSSES SGSYSCQATN PASGERIQLP 240
  241 GSLQLQVTPE QRSESKSPHL LRGQPSSQEI TIREGSSLLL LCPGVGSPPP TVVWSSPDVV 300
  301 GAVKNKRSKV FGHALEISNT RVNDAGTYIC FQDNGVRPAL EHYIKVHVEQ PPQIVRPPWA 360
  361 DLTNEGDRLK LECKATGVPT PEIYWLLNGH SSIDDSEAEL SNNFLILHSV LKRHAGYVQC 420
  421 FARNRLGEHS AGTLLQVNPK QIQEPRESGG THRPKPNQGS RQKQMYPPTP PNVTRLSDES 480
  481 VMLRWMVPRN DGLPIVIFKV QYRMVGKRKN WQTTNDNIPY GKPKWNSELG KSFTASVTDL 540
  541 KPQHTYRFRI LAVYSNNDNK ESNTSAKFYL QPGAALDPMP VPELLEIEEY SETAVVLHWS 600
  601 LASDADEHLI TGYYAYYRPS SSAGEYFKAT IEGAHARSFK IAPLETATMY EFKLQSFSAA 660
  661 SASEFSALKQ GRTQRPKTST TEEPTLQMGD RDTTTPSHNE TFNMSPMLTG TIGGGAVLIL 720
  721 LLISTCFCVC RRRNSRSRGN NPNKPRMAEL RDDFVPLGNC SPTKQRQRTR HIHITLNPLA 780
  781 QQQQQALEEK NDTDQDAPYY QRPSSYDYDP TLRRMSSSSL RRSQRTLERA GGSNGSNNGN 840
  841 NNNLNQSAEA GSIENPGKPG RVLMKRPRLS SRSENLSSGS LNSVGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle