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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG7806-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVVDWGDF AWNWTQFCPT GLKPFANETN DLLPCFQEIL LQLPVYTLFA AISAYNFGNQ  60
   61 SRHVVRNGLQ LRMLSIRTFL AMVLALLPVA KVFAFHQQGV ELFAADLLVV SAECIMWVVH 120
  121 SGFLLTARQY GELSHRGSLL INVVWLTVVV LDAVWLRTSR HFSWWPWSLA TLVCDLLFGV 180
  181 TLIPKGSAVY SSLPRSGVSA REDEGLLSQR YTYFQFDLNE SHLGHAQDEA NLGSRFLFHW 240
  241 VQPLILKGVA GKLRKIEDLF DLPDALNITR LSEKLHLALS QSQSLWRALH RCFGVEFYLI 300
  301 GILRLIADLS GFAGPLLLGG LLRQDHADPN QVYYYALGLF GSTLLSAVCA THFDWRMAMV 360
  361 SMKMRVGVVN SIYRKALEAR GLKESKPDLL NLMSTDTDRI VNSCISFHFF WSIPFKLFTT 420
  421 LYLLYLQLGA AFLAGVIFAA LLIPINRWLA KRIGIFSSGL MTAKDARLSA TTETMQGAKQ 480
  481 IKINAWEDIF ITKIRGLRQE ELRFLSKRKY LDAMCVYFWA TTPVLMCLLT FGVSVLMGNP 540
  541 LIASTTYTSV ALLYMLIGPL NAFPWVLNGL IEAWVSIKRV QQLMDVPNLD YSSYYNPIMR 600
  601 GSGGSGAGDD APLDAPKASV LQMKCASFCH DSDEQTSPTP FRMKDINVDI KAGQLVCIEG 660
  661 PVGGGKSSFL SAIVANLQCT DGEVCVQELT TGFGYVPQSP WLQRGTIRDN IVWGAQFDEQ 720
  721 WYKTVLHACA LEEDLQILGG DLVGVGENGR TLSGGQRARV ALARAVYQDK KVYLLDDVLS 780
  781 SLDAHVARHI IKHCILRLLK HKTRIVVTRN IQLFFHANQI LQVKDGQLLP SEYMTQSIEL 840
  841 SLDEDADDEQ EPTVRRRSVE LSNQYDKKSL DSLLLEELRE YGHLSGNVFT CYWKAVTSPL 900
  901 AFTVLLSVVL MQLTRNLSDA WLAYWVTETT LDPHKNDTSL DHILMRPTVG NETESGHTTK 960
  961 FYLSIFTAIA VSNSLVTLAR AFLFAYAGIK AAIFMHEKLL KKVMFAKFNF FDITSVGRIL1020
 1021 NRFSSDTNTV DDSLPFILNI LLAQLAGLVG ALCVSLYAMP WLGLVIIPMV PIYLSLQQRY1080
 1081 RHASRDIKRL SSNAMSPLYT HFTETLQGLT TIRSMRASPR FQRDFQVKLE ESIKAQLTQS1140
 1141 AAQQWLALRL QLLGTLLVGG AGLLAAITAS HTTNPGLVGL CISYALSITG QLGDLLHAVA1200
 1201 ETEQELVAVE RIDQYLQLEE EQNASGSAEP PFGWPTQGVL SFREVQLSYR EHLAPALRGI1260
 1261 TFQTEAFERI GIVGRTGAGK TSVLAALLRV APLTHGEIRL DQVNLKTLPL SVLRERIGVI1320
 1321 TQEPFLFEGT VRENLDPRHG FYDSEIWHAI KNSAAATLLV QQLGGLDGKV ETCGNNLSAG1380
 1381 QRQLLCLARA LLKNAKVVAI DEGTSNLDDE SDLSIQQALR NAFKSCTLLF IAHRLRGLHA1440
 1441 MDRIIVLDDG RICEEGNPQS LASDSSTIFY GMLLAQDIDP GEFIRSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle