YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Ugt37a1-PA
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVAKILAEQ GHNVTVVTVL EPTITHKNIN LVTVPMTKEE IKQRSETIGA KQKNTSSNRF  60
   61 ISILNMSGQM DSMLRKMADV LKDQRVKELY LNKDNHFDLV ISGYFMNDYQ LGFARKVNAP 120
  121 VVVLAPSPPS QMLNSLIGNP HDKVEKEKGM TFGQRLDSYI SSLLYGIFLR QIDQRNRQYY 180
  181 NEIFGDDPTM PEYTDILRNT SLVFFCSHAA SEGPIRPSVP AAIEIGGIQI KDKPDPLPKN 240
  241 LEKFLGNATH GAILLSLGSN VQGSHIKADT VKKIFSVLSN LKQRVIWKWD DLDKTPGKSD 300
  301 NILYSRWLPQ DDILAHPSVK LFINHAGKGG ISEAQYHGKP MLSLPVFGDQ PGNAHAMVKS 360
  361 GFGLTLSLLT LEEEPFRAAV LEILSNPKYS QRVVKFSSLY RDRPASARES LIFWTEYVIR 420
  421 HHGAAHLQSP LVHMDFIAAN NLDIYALIGA ISIGLLLMLK KVVQITCRRL RTKLNKVKKQ 480
  481

Type	Start	End	Confidence
Non-Cytoplasmic	1	443	0.93
Transmembrane Helix	444	463	0.77
Cytoplasmic	464	480	0.82