YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	lectin-46Cb-PB
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHLLTALVA LLSILPRGEL LGSGPPCPRR YLRRINGKCY YFSVKKMNWF GALNNCLRKG  60
   61 LTLADLSNQR DFDGAIGFLS GLGNTEDFWF GGNDLYHEGR FQYISNGRLV RYYSNYSNVL 120
  121 PLEHSECDDC LEVRIRSEIN MVSADNCHER QYFICSERYC QGTDSGKKPK HHSHEHLHHF 180
  181 HHDIGGSAEG EDDGDGDGDH DRQDPIASGS VEHPEPDSED AVGALDVPDD DQPGQNGVSV 240
  241 TPGAEETNTV GGTGEPGATA TPAAGAEAVS PAAEGAAPAG AAPAAEGAAT PAADGATPAP 300
  301 TPAPGAEAPA AAAAETPAPP AA

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	322	0.99