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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MCPH1-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKFLLRNPT WKTKTYGSVV ASSAAAAKKT AASSTRRPLH DSNLGDFRSK AAAPSPKSLS  60
   61 QAPADDQAAR DRLMLKPALA VSKAISQHRS EFHQDENEAG AEGSAAKPDP PIGAATPTRQ 120
  121 EGHWARLQQD LNSPNAALRL RAIRALKSPT KSAYNTFDVP LAEQSIITME ERNPQEPPSL 180
  181 PELLKDIVVY VEVRTGNDNR SEGVKSIIAK MGAQVKDRLT RTTTHVVFKD GLLSTYKKAT 240
  241 EWNIPVVSIL WIEACKVQLK ICDPKQFPIS NIRMYEYPEL FGKMPRVKFM QPDSELNQRP 300
  301 RKRQGTPTSS KDNEPGSTNK RAQTGTPTTT TPKNDISRFF RAINHNKPSD DEAIESPATK 360
  361 LLNRISSGCY TPLPAGGTPQ LMGTNGSGDA VAQKVQAQKS LQFGEQTDSN TPQAKPSSTS 420
  421 RPRRSTVDPP PVMTPPVRTT RRRSCVAEIS SPAATDTRMT RRRSSLLTST VIHEADPTQT 480
  481 AVAEPRMTRR RSSLLGIAKQ AEETAQRQTI QPITEELAPV EENRNSIIMA ETNIINNTNC 540
  541 LEQSIEITAV EAEASFKADR RGTLYASELM DISSPRRRSV AKSSLELRQE NLAPRARQSL 600
  601 SNVTTQTSFL DVEQQVTPLF SSTRLPTGQT TGNRRRTIFN MDMDVINESI ERMNQSHRMS 660
  661 LALANKAELG ESCQVHEQEP PQAEPVPSQE PKRRRLFNPN DEVVISPAMS NRKSRLSITG 720
  721 SGSSSSVQKR RRSLATPAKS SSSELCATTP LSKAVTNKEA EKSKSNTEIS EASLDAVPEV 780
  781 KKSTSNAGEE NEKPKGKSRT RIRTLVHTNM HQEQINVIRK VGNTTE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle