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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ranbp11-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMATGAVSG AAAAGAGASV EQLVAQTLQA ATNPSHEIVQ KAEAQLREWE QQPGFFPTIA  60
   61 RLSMRRGGGG DVVSSTEDSE VKVRWMAAVY LKNGVERYWR PNSRQELPAE QKQQIREVLL 120
  121 RHYDAEEVPQ VALQVAVLLG RLARTDYPRF WPDLLPTLMK QLQSCGTDGD SALQQRILIV 180
  181 LHYVLKALAS RRLMAEQRAF QELGLQIFGY LAWDIWAPLT TRFLQLVRKD EAMALNALQR 240
  241 AYVVMRTLRK LVVYGCAKPY KSTDHMNFVE QLFQRLRQCL ELRYELKVGS ATPGTATILT 300
  301 ELERFVIKMM KTLNELMERH SVSFARFVPV ALEFSFHYVF HEGTALIFDA GDRINFKNFA 360
  361 IQALNMLKGI MLSGNDSISA PPEGGAHIED ELLASAAQSQ AKFFTAERVT YICEKIVTHY 420
  421 FLLTQQELEE WQQDPEGYDQ DDGGGDAWKY ALRPSVETLY FTCFTQHSQV MIPEVLRFVR 480
  481 RAQQLQLTPE SDLKAILLKD AIYNAVGQAA FHFFNKLDFG AWLTSQLLAE LRVEALNFRI 540
  541 LRRRIIWLVG HWVGVQLPRE LRPLAYEACL HLLRPQEDMP TRLAAARTLN LLIDDFEFMP 600
  601 EAFHPYFPSL FEALFLLLHE AGECDTKIVV LGTMTLLVEK MSEYIEPQAL QFIAYLPLLW 660
  661 RESEEHDLLR CAIIGTLEQL VRTIRDVPEP MKPFLYSVIE LSTDLQQPSH VYLIEDGIML 720
  721 WLAVIGNSTA LTPELLGLCD HLLPIIEMSS ENLRTVLQLI HAYILLDAQA YLSRYGEGFV 780
  781 AYCVRSFEDI RVEGIIAMLR IIETCLKTDA ALGLRLVRPA LPFVFQQVCL KQEYPMTMGW 840
  841 YLTIVARTLL IDQSVFMSVV QQLPQADALA RILDVWIEMF PMVPDTHAEK RKLFCLAFAS 900
  901 IFGSNELLLA RLPHILQLVD ETLGEVMDKQ YAATEEGASQ ATPRFYDSLV IHDEHELDDL 960
  961 QQQLGSGGGV SEEFHTKGYP AKTYHDDRHR QLVLKDPVYK IPLTEYLKWQ LQSLQAQLGS1020
 1021 QRYEQVMCSV VPEVRERITM YIEQTVPKAC VVCAGSGSGS GAPADRTLSE QVESG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle