YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0311843, CG1...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTWKKQMALL AKPYYWVNIL LAISYLLAKK TQFICTRLFI LAGEDEACDL DSREVEILFF  60
   61 LLIVVMIRSR KTGSVTMINY LASSFLYTKV ANAILWAYAD FRYGLGFLLL CVLVGMVLPE 120
  121 PSYRGPEHIT YFRNAQVFEE ELARDKRTSW LICFYTVWNP SCVNFAPVFA ELSAEYNTDH 180
  181 LKFGKIDIGR FPDVAQKYRI SDSSFSRQLP TVILFQQGKE TDRRPCVDSK GKLQKFFFSS 240
  241 DNVRATFGLN QLYKEAIERL PIAPKEAKKV Q

Type	Start	End	Confidence
Cytoplasmic	1	75	0.56
Transmembrane Helix	76	95	0.55
Non-Cytoplasmic	96	102	0.55
Transmembrane Helix	103	123	0.73
Cytoplasmic	124	271	0.62