YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0307618, CG9...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	12	0.88
Transmembrane Helix	13	31	0.92
Non-Cytoplasmic	32	70	0.91
Transmembrane Helix	71	92	0.87
Cytoplasmic	93	99	0.85
Transmembrane Helix	100	120	0.94
Non-Cytoplasmic	121	126	0.83
Transmembrane Helix	127	148	0.92
Cytoplasmic	149	159	0.89
Transmembrane Helix	160	182	0.91
Non-Cytoplasmic	183	188	0.90
Transmembrane Helix	189	209	0.96
Cytoplasmic	210	247	0.97
Transmembrane Helix	248	273	0.79
Non-Cytoplasmic	274	292	0.82
Transmembrane Helix	293	314	0.86
Cytoplasmic	315	327	0.91
Transmembrane Helix	328	347	0.94
Non-Cytoplasmic	348	353	0.78
Transmembrane Helix	354	374	0.89
Cytoplasmic	375	384	0.80
Transmembrane Helix	385	409	0.87
Non-Cytoplasmic	410	418	0.87
Transmembrane Helix	419	440	0.94
Cytoplasmic	441	465	0.91

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFMPCFYVP KRINLAIMLF MACLLSYMMR VNLSINIIAM VEDTSSHENG TEVEALPDYG  60
   61 PRYNWTQSDQ ALLLGAYFYG YMITSLPAGT LAEMLGARNV AGYSCLVAGI LTALTPAAAA 120
  121 WDKYAVFAVR FLIGFLNGVV YPCCHSLVSK WSPPDEKGKF VASLMGGTFG TVITWPISGV 180
  181 IIENLGWDWA FYIVGIFVLV VVAIWFYLVA DTPAQHSTIS LKEREYIESS LGDTLSNKKK 240
  241 WPPYKELVLS LPFWSLMMLH YGSMWGLFFL ITATPKFLSE VLGFNLSSAG FLSSLPHVAR 300
  301 LLCAFGFGAV ADWIRRRGWL SVTRMRKAFC LPSHILPGVM LIILAYFGRD PYVCVAIMTI 360
  361 SLGFNGAATA SNLANSQDLA PNYAGTLYGI INCVGTTPGI FSPLIVAAFT KNENTIDQWH 420
  421 WVFIIGAAAY ILPALFFWVF GSGKIQKWNE VQTTESREDI VNTKL