YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Gr59b-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYWMIKLYF RYSLAIGITS QQFSNRKFFS TLFSRTYALI ANIVTLIMLP IVMWQVQLVF  60
   61 QQKKTFPKLI LITNNVREAV SFLVILYTVL SRGFRDTAFK EMQPLLLTLF REEKRCGFKG 120
  121 IGGVRRSLRI LLFVKFFTLS WLCVTDVLFL LYSTDALIWV NVLRFFFKCN TNNILEMVPM 180
  181 GYFLALWHIA RGFDCVNRRL DQIVKSKSTR KHRELQHLWL LHACLTKTAL NINKIYAPQM 240
  241 LASRFDNFVN GVIQAYWGAV FTFDLSTPFF WVVYGSVQYH VRCLDYYLID NMCDVAVEYH 300
  301 DSAKHSWSEV RWTKEISSYV IYANSTKLQL WSCGLFQANR SMWFAMISSV LYYILVLLQF 360
  361 HLVMRK

Type	Start	End	Confidence
Cytoplasmic	1	32	0.55
Transmembrane Helix	33	58	0.80
Non-Cytoplasmic	59	74	0.45
Transmembrane Helix	75	90	0.50
Cytoplasmic	91	130	0.91
Transmembrane Helix	131	153	0.87
Non-Cytoplasmic	154	173	0.82
Transmembrane Helix	174	190	0.78
Cytoplasmic	191	251	0.67
Transmembrane Helix	252	272	0.72
Non-Cytoplasmic	273	340	0.60
Transmembrane Helix	341	363	0.90
Cytoplasmic	364	366	0.60