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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GC-PB, GC-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSKRKLPT KPSATEDATP HKDTPRSSEE FPTDVNHKSA KKSFLPQNAF FRDCLGHDLS  60
   61 NFTSLTNFTS WLNRPVDGAA LGIFRLLYGA AMLIDIAEER GGGQLDVRFQ EPLHCHFPLF 120
  121 NGMRALDYPL MGCVYLCMWL GAWGIMLGYR FRTSCLAFLI PYWYIFLLDK PTWNNHSYLF 180
  181 GLVGTLLLFT QAESYCSLDR WLNPRKSHCI PYWNYFLIKF QFFILYMYAG LKKFSLEWLS 240
  241 GYAMSNLSYH WVFAPFRQVI DPELIDLLIV HWFTAFFDVS IAFFMTLEKT RLLVTPFMLS 300
  301 FHLMNSRLFV IGMFPWVCLA EVPLFFSFDW PRRLGNWSKI QDVHPKDPEE ELSKPGILAR 360
  361 LRTGLILAYC GLQLFLPYSH FITKGYNNWT NGLYGYSWDM MVHSYDTLQT SIQVVDNESR 420
  421 QVHNLNPYAF TEYDRWTKYA DMAVQYARCI EENLQEKQPH IGRNISIYFD IWCSMNGRFQ 480
  481 QRSFDPREDL LRAKWSPFES TSWSLPLLNE LNHMRPKLRT IETEVLAWNN YSDVIFVADF 540
  541 PGLTLTNFIS PDLINCTLTI LEGNVRYRNE RDPEAYFLTA GKSIGLESNI THLVTTIGQK 600
  601 PASYLFTYTN KTMLEQGITI EQPDTEERSV LPLWQEFQHR VTNYQQFLGH IGNCLMYLLY 660
  661 DVPIPQAVKG GD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle