YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	n-syb-PG, n-syb-PE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKDKNKEQ ADAAPAGDAP PNAGAPAGEG GDGEIVGGPH NPQQIAAQKR LQQTQAQVDE  60
   61 VVDIMRTNVE KVLERDSKLS ELDDRADALQ QGASQFEQQA GKLKRKFWLQ NLKMMIIMGV 120
  121 IGLVVVGIIA NKLGLIGGEQ PPQYQYPPQY MQPPPPPPQQ PAGGQSSLVD AAGAGDGAGA 180
  181 GGSAGAGDHG GV

Type	Start	End	Confidence
Cytoplasmic	1	113	0.97
Transmembrane Helix	114	135	0.90
Non-Cytoplasmic	136	192	0.94