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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: sec63-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.20
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGQKFQYDE SGGTFYYFVL SFLALILIPT TIYYWPRKKK QDNSKLKEEC QCADCQKKKT  60
   61 ILANAEPYRA LTSWTIKLTI VLGWALLLFL TYRVSQFDYE MASFDPFEIL NVPPTSSQAE 120
  121 IKKAYYRLSK VLHPDKETGD EKSFMMLSKA YQALTDDVAK ENYEKYGNPD GPGAMSFGIA 180
  181 LPSWIVEKEN SVWVLGLYGL VFMVAMPSAV GVWWYRSIRF SGDKVLLDTT QMYFYFIHKT 240
  241 PHMLLKRALM VLAASLEFDK RHNSQVQERQ SDNDEVPALI RQLPNLNEKC KEHPLCRMYS 300
  301 IKARAILHAH LSRMPLNPET LERDRQFVVK KCPYLVQEMV SCVHQLVMMA YARRVPRLPS 360
  361 IETIENCMKM SPMIIQGLWE FKSPLLQLPH LTEDHLYFMN KKRHVKNLQQ FAQLKPEESR 420
  421 QLLKNLSDFE YENTMKVLGK MPLIDFSIRC EVIDDENTNV VTAGAIVTVT VTLERKDMKT 480
  481 LFGDTKAPEK QGIKDETNEE AAGDEDEAAA AAPVKKASAW AKPRKGGKGK GGKKPAQNQK 540
  541 NQKKVPAKAA TTATITASED QAAAGNSDAE SEAGNADGSD VESAAGSGSE DEEKGKNNSS 600
  601 LDDDDDEEWE RLQAKLNKRE RLEGKSRLSH TVHCPYFPEE KQEYWWTYIC DRKSRTLLTA 660
  661 PYHVTNLVEK EEIQLKFTAP RWPGVYTFTV CLRSDSYLGM DQQQELKLDV QKAPAPPTDH 720
  721 PQWDLSESEP EHTDQQENLS DYTTDTSDEE DGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle