YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Sgs3-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTIATALA SILLIGSANV ANCCDCGCPT TTTTCAPRTT QPPCTTTTTT TTTTCAPPTQ  60
   61 QSTTQPPCTT SKPTTPKQTT TQLPCTTPTT TKATTTKPTT TKATTTKATT TKPTTTKQTT 120
  121 TQLPCTTPTT TKQTTTQLPC TTPTTTKPTT TKPTTTKPTT TKPTTTKPTT TKPTTTKPTT 180
  181 TKPTTTKPTT TKPTTTKPTT TKPTTTKPTT TKPTTTKPTT TKPTTTKPTT TKPTTTKPTT 240
  241 TKPTTTKPTT TKPTTPKPCG CKSCGPGGEP CNGCAKRDAL CQDLNGVLRN LERKIRQCVC 300
  301 GEPQWLL

Type	Start	End	Confidence
Signal Peptide	1	23	0.96
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	307	0.99