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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0306011, CG4...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRWPFNLLL LLSVAVRDCS NHRTVLTVGY LTALTGDLKT RQGLAISGAL TMALDEVNKD  60
   61 PNLLPNVYLD LRWNDTKGDT VLATKAITEM ICDGIATIFG PEGPCYVEAI VSQSRNIPMI 120
  121 SYKCAEYRAS AIPTFARTEP PDTQVVKSLL ALLRYYAWNK FSILYEDVWS PVADLLKDQA 180
  181 TKRNMTINHK QSFIDNRVKC CEQMLDCCRS GYWYQLVQNT MNRTRIYVFL GAANSLVDFM 240
  241 SSMETAGLFA RGEYMVIFVD MMVYSEREAE KYLRRVDQIT FMSNCHSTEN FNQMARSLLV 300
  301 VASTPPTKDY IQFTKQVQKY SSKPPFNLEI PRLFVESNFS KFISIYAAYL YDSVKLYAWA 360
  361 VDKMLREETR VLTDDVIFEV ASNGTRVIDT IIKNRTYMSI TGSKIKIDQY GDSEGNFSVL 420
  421 AYKPHKWNNS NNMPCNYHMV PVAYFHQGEE HPEYKLINGS IDWPSGGEKP ADEPMCGFAN 480
  481 ELCKKDDTHY TSTVAAVVLG VLLFCSGVIT MSIYRKWKIE LEIEGLLWKI DPNEIKGYSG 540
  541 NEIVSSPSKV SLMSAQSYGS RWTNQFVTST GRLRGAVVRI KELKFPRKRD ISREIMKEMR 600
  601 LLRELRHDNI NSFIGASVEP TRILLVTDYC AKGSLYDIIE NEDIKLDDLF IASLIHDLIK 660
  661 GMIYIHNSQL VYHGNLKSSN CVVTSRWMLQ VTDFGLHELR QCAENESIGE HQHYRNQLWR 720
  721 APELLRNHIH GSQKGDVYAF AIIMYEIFSR KGPFGQINFE PKEIVDYVKK LPLKGEDPFR 780
  781 PEVESIIEAE SCPDYVLACI RDCWAEDPEE RPEFSVIRNR LKKMRGGKTK NIMDQMMEMM 840
  841 EKYANNLEDI VTERTRLLCE EKMKTEDLLH RMLPQSVAEK LTMGQGVEPV SYDLVTIYFS 900
  901 DIVGFTAMSA ESTPLQVVNF LNDLYTVFDR IIRGYDVYKV ETIGDAYMVV SGLPIKNGDR 960
  961 HAGEIASMAL ELLHAVKQHR IAHRPNETLK LRIGMHTGPV VAGVVGLTMP RYCLFGDTVN1020
 1021 TASRMESNGE ALKIHISNKC KLALDKLGGG YITEKRGLVN MKGKGDVVTW WLTGANENAI1080
 1081 QKKLVDMMDM PPPLFSRPRK SPKLNPDSRQ PSIQAMHFCG TGSRRQSTVP RAMDGESTYS1140
 1141 LQGSVRESPR MVSKRDRDRE RPPINGLGAG HFVGGALLES AQASLSTLNH SETNETNCDM1200
 1201 DGGSGGVSGS GSGLVRQPNA LHKPLAMVRP HRIISAAQLP QLGDNDDDSA DTLLRESRSL1260
 1261 DPMPMQQLRK RHDRVKLPPS KLSKNNSRSL DTGVSLISGN PNGEVHSSQL DLDNEMTANP1320
 1321 VDATDGYDDE LGLLMRHDNG QLPALRYSGS FPNAQISIVP TGRSAGGGGG GREGGGSNCA1380
 1381 KHLNNNCNGG VNVEDDLESP LLQRQASLSV PPEEMLAHNK RWHSLEHMDG PGGHGGNSVS1440
 1441 YAADIDNRHP GDLDFFSGSS NQHHRSKAAG GSKLTNWMTN IFKGNGVRSG EARRVGILPS1500
 1501 GVHGARTGFT DMAASAAARD RESIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle