YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	sunz-PA
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRIDLTLDD MANNKFLTMY STLIKSFAAS TEFSTNEVVS LLIVFYKYAL NNRSRMMSTS  60
   61 QLYNLFLVSF GIFDVTIIDR ISMNITQDGR SVSPEAWMRL FCVFFNGSLQ ERMKFAFEVY 120
  121 TSGGAVVLNR EVVGVAIEQF FTGDDDDEVN ELRADMCEFI FGKFDTDKDG VIAFEEYAEI 180
  181 VQNQPGLLEF LGKIFPDDKD RSLVAYCHNI ESMFPPEGLY

Type	Start	End	Confidence
Cytoplasmic	1	61	0.48
Transmembrane Helix	62	78	0.58
Non-Cytoplasmic	79	220	0.87