YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0310761, Tim...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYNRQPCPI RIVEDCGCAF MMGTIGGSLF EFLKGFRNAP TGLQRRLYGG IDLVKMRTPS  60
   61 IAGSFAVWGA TFSTVDCALV HYRQREDAWN SILSGAATGG ILAARNGIRA MANSALVGCL 120
  121 VLAMIEGAGA AVATINAADK GAGIVIKPQR AQWEAILETI DPKRASSTQD FALAEFERVL 180
  181 DKCRASREPN LLQDIPVKSH ERDSKQKPFY SLLDLVKLSQ MF

Type	Start	End	Confidence
Cytoplasmic	1	11	0.80
Transmembrane Helix	12	33	0.61
Non-Cytoplasmic	34	59	0.67
Transmembrane Helix	60	80	0.74
Cytoplasmic	81	87	0.64
Transmembrane Helix	88	108	0.66
Non-Cytoplasmic	109	113	0.60
Transmembrane Helix	114	137	0.74
Cytoplasmic	138	222	0.71