YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG9722-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDILQEPVH QYGNRSHQAE CIPLGRYTAY GSEIGQDDPD KGLGFCSASI RRGFIRKVYL  60
   61 ILLAQLITSL VVIVSLTADK RVRLMVAEST WIFVVAILIV VFSLVALGCN EDLRRQTPAN 120
  121 FIFLSAFTIA ESFLLGVAAC RYAPMEIFMA VLITASVCLG LTLFALQTRY DFTVMGGLLV 180
  181 SCLIILLFFG IVTIFVGGHM VTTIYASLSA LLFSVYLVYD TQLMMGGKHR YSISPEEYIF 240
  241 AALNIYMDVM NIFLDILQLI GGSD

Type	Start	End	Confidence
Cytoplasmic	1	57	0.99
Transmembrane Helix	58	78	0.95
Non-Cytoplasmic	79	88	0.83
Transmembrane Helix	89	109	0.94
Cytoplasmic	110	118	0.89
Transmembrane Helix	119	139	0.94
Non-Cytoplasmic	140	146	0.76
Transmembrane Helix	147	166	0.96
Cytoplasmic	167	173	0.82
Transmembrane Helix	174	195	0.92
Non-Cytoplasmic	196	200	0.74
Transmembrane Helix	201	220	0.91
Cytoplasmic	221	239	0.87
Transmembrane Helix	240	260	0.57
Non-Cytoplasmic	261	264	0.52