YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0303078, Htr...
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRGSHRLE VIFKRCIASP VLHSHAANRR SSQLAIKEGD PNSNGNSGQY QQNGEQKEKG  60
   61 WRRLVRFFVP FSLGAVVSAA IIQREDLTPT IAASKMTGRR RDFNFIADVV AGCADSVVYI 120
  121 EIKDTRHFDY FSGQPITASN GSGFIIEQNG LILTNAHVVI NKPHTMVQVR LSDGRTFPAT 180
  181 IEDVDQTSDL ATLRIQVNNL SVMRLGKSST LRSGEWVVAL GSPLALSNTV TAGVISSTQR 240
  241 ASQELGLRNR DINYLQTDAA ITFGNSGGPL VNLDGEAIGV NSMKVTAGIS FAIPIDYVKV 300
  301 FLERAAEKRK KGSAYKTGYP VKRYMGITML TLTPDILFEL KSRSQNMPSN LTHGVLVWKV 360
  361 IVGSPAHSGG LQPGDIVTHI NKKEIKNSSD VYDALADNSK TLDIVILRGV KQMHVTITPE 420
  421 DP

Type	Start	End	Confidence
Cytoplasmic	1	63	0.65
Transmembrane Helix	64	82	0.59
Non-Cytoplasmic	83	422	0.95