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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG16718-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNLGSAKVG ALEEATSPPP FSKDESFQLL ERSPHNPAIS PTTTVPLEPP FTTPLAPFDM  60
   61 ELMKRHNLHE RLTGKESFWR GRDTSQRFLD QEQLSASRES LGAADKRARF AESNAPTLQL 120
  121 PESAEPRANG KRPTGNRTNP SNPAAPLLPM TDPDFVKGNV GGVYDDRECS CPREFYQRGE 180
  181 INTSLFFEDC VRSIDFVLAY RINAHEPTEL ENTEKRRVFE ANLISQGLEV ESSQKDQIWF 240
  241 VKIHAPLEVL RRYAEILKLR MPMKEIPGMS VVNRSTKSVF SSLKHVFQFF LRNIYVDEEI 300
  301 FPKRAHRFTA IYSRDKEYLF DIRQDCFFTT AVRSRIVEFI LDRQRFPAKN QHDMAFGIER 360
  361 LIAEGVYSAA YPLHDGEITE TGTMRALLYK HWASVPKWYR YQPLDDIKEY FGVKIGLYFA 420
  421 WLGYYTYMLL LASIVGVICF LYSWFSLKNY VPVKDICQSG NTNITMCPLC DWCNFWDLKE 480
  481 TCNYAKVTYL IDNPSTVFFA VFMSFWATLF LELWKRYSAE ITHRWDLTGF DVHEEHPRPQ 540
  541 YLARLEHIPP TRVDYVTNIK EPTVPFWRMK LPATVFSFSV VLLLIALAFV ALLAVVVYRM 600
  601 SMLAALKVGA SPMTTSSAIV LATASAAFVN LCLLYILNYM YNHLAEYLTE LEMWRTQTQF 660
  661 DDSLTLKIYL LQFVNYYASI FYIAFFKGKF VGHPGEYNKL FDYRQEECSS GGCLTELCIQ 720
  721 LAIIMVGKQA FNTILEVYLP MFWRKVLAIQ VGLSRLFNNT PNPDKAKDER WMRDFKLLDW 780
  781 GARGLFPEYL EMVLQYGFVT IFVAAFPLAP FFALLNNILE MRLDAKKLLT HHKRPVSQRV 840
  841 RDIGVWYRIL DCIGKLSVIT NGFIIAFTSD MIPRLVYRHY VNKQGTLDGY LNFTLSEFKV 900
  901 IDSPTLYSLA GDLSNITTCR YTDFRLPPSS PEKYTLSSMF YIILACRLGF VVVFENFVAL 960
  961 VMILVRWCIP DMSVELRDQI RREVYVTNEI IIDQEAHRAR FERAKRSSSV LQTPVDQDMD1020
 1021 AASIQEPNAK FINIEKLLTE NLTQIEMDAI IHGENPITGI SGADCLDEVH KKLSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle