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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG31233-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.60
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCVQVGGMS VFLVLLLAIS ATQAAVVRQY PILDHLQHLE NPMQRLVVPL ADEDNYRLPY  60
   61 DTIPSHYAVS LSTNVHTGDT VFNGTVAITL SVLNTTTKIV VHARQLENFT ASIIQQGVTE 120
  121 AVAQELVYEY EAEREFLTFS KTGLTFPEDT TWILTINYQG HLRTDNGGFY LSTYTDEEGN 180
  181 TKYLATTQFE STDARHAFPC YDEPSKRAEF TITIKHDPSY NAISNMPVDS SSTSGVTVFQ 240
  241 KTVNMPSYLV AFIVSEFVFS EGELNGLPQR VFSRNGTEHE QEWALTTGML VEKRLSGYFD 300
  301 VPFALPKLDQ AGIPDFAAGA MENWGLATYR EEYLLYNTEN STTSTQTNIA TIEAHEDAHM 360
  361 WFGDLVAIEW WSFLWLKEGF ATLFENLAVD LAYPEWDIFQ TFHAGSYQSA LVNDASANAR 420
  421 PMSHFVQKPS EIALLYDSVS YAKAGSVLDM WRHALTNTVF QRGLHNYLVD NQFTAANPSK 480
  481 LFEAIAKAAV EENYEVKATV PDMMGSWTNQ GGVPLLTVTR NYDNGSFTVK QSVYTNDKDY 540
  541 TNDKLWYVPI NYAESKNPDF RNTEATHYLL NQSEITIYSD LDQTNWLILN KKSTGYYRVL 600
  601 YDAQNYQLIT SALITRPHKI DPRNRAQLIN DLYRFATSGR VPHATLLELL TYLPQEDQYS 660
  661 PWSATNTVIT LLNRYLSGDA DYGNFQFYVR ELVSLQFDKF GVNDNKGDHH LVPFTRNVLI 720
  721 NLACLAGLEN CLTETTAKLT ALVEEGTKIE PNLQSQVYCN GLKQADDKTF DFVFNKLLNS 780
  781 TDQAERRLLI SALGCSQNTA QLEKFVYSSI EPEGLRDQER ITVLSPVYSR GEVGLLVAIE 840
  841 FLQKNWEKYG QLNSGFGGVN PLYSDIVGIS AYTVNDKQKD ALQELVDTVK GSEYVPSTLQ 900
  901 DSVDSNVNAN YAWLASNRDP LMTWVAGFRS GSSALNASIL AILACLLAAK LF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle