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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10726732, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRIKDIRW LSVWCRRFTV DFGEVFIPPN LDVPKPRVLP EFKRLAHGLR SSNISVLDAK  60
   61 TFYIPNLHYD GAGPDAYFWV GNGSEPNIMG IKVPNESGSL EPLRGYQGED IEIQLPESLT 120
  121 VYDIDWLAVW CVEYRHNFGH VYIPRDLDVP PALGQTKITT TTTPRPVYSN CREILPNKLQ 180
  181 IKWELQGEYL QVELFGRITE DQYMAFGLSG ANGRAQMSQS DVVVAFYDTT TRVFRAEDYF 240
  241 ISDLSQCDGQ RGACPDERIG GRNDVIVLSG DRKNGVTSIR YKRLLQPNEA IYDAPIPTDR 300
  301 EVSVIAAIGP LNARKEANAH SHTASDHNQD DIRINFSARN DHACQSSLYD VKDESGPRPW 360
  361 PTRKIEGVRK FRASIGPTGG KRGYTSITGV PSWGIAWYVN DLLIPEITVE RGLTYEFIIE 420
  421 GGNDPSQPAR YHPFYITDSP EGGLGQKMGL EARKQKAYAG VEYDEDGNAI PTGGGRYCEW 480
  481 EHQTIDRSAE IDTFEEYMKT LVFKCEDGEP GYLNWTVPTN APDQLYYQCF THNNLGWKIN 540
  541 VVDMGSSGGS KVSSHQFSFY GIFTVFSLVA TSLPFFGHVL A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle