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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Gp93-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYFLLVGLL LLAGINQIAA DDEAATTETI DLDLGSFKEG SRTDAETLKR EEEAIQLDGL  60
   61 NVAQLKEIRE KAKKFTFQTE VNRMMKLIIN SLYRNKEIFL RELISNASDA IDKIRLLALS 120
  121 NSKELETNPE LHIRIKADKE NKALHIMDSG IGMTHQDLIN NLGTIAKSGT ADFLAKMQDP 180
  181 SKSEGLDMND MIGQFGVGFY SAFLVADRVV VTTKHNDDKQ YIWESDANSF SITEDPRGDT 240
  241 LKRGSVISLY LKEEAQDFLE EDTVRELIRK YSQFINFPIR MWSSKTVEEE VPVEEEAKPE 300
  301 KSEDDVEDED AKVEEAEDEK PKTKKVSKTT WDWTLINDSK PIWTRKPAEV TEDEYTSFYK 360
  361 SLTKDSSEPL TQTHFIAEGE VTFKSLLYVP KVQPSESFNR YGTKSDNIKL YVRRVFITDE 420
  421 FNDMMPNYLS FIRGVVDSDD LPLNVSRETL QQHKLIKVIK KKLVRKVLDM LKKIDKEAYE 480
  481 KFWKEFSTNI KLGVMEDPSN RSRLAKLLRF QTSNGKGVTS LAEYKERMKA KQEHIYYIAG 540
  541 ANRAEVEKSP FVERLLSKGY EVLYLVEAVD EYCISALPEF DGKKFQNVAK EGFQLNESEK 600
  601 SKKNFESLKS TFEPLVKWLN DVALKDQISK AQVSERLSNS PCALVAGVFG WTGNMERLAM 660
  661 SNAHQKSDDP QRTYYLNQKK TLEINPRHPL MRELLRRVEA DEADDTAKDM AVMMFRTATL 720
  721 RSGYMLQETS QFADSIEQMM RQTLGVSQDE QVEFDEEEED DAEETATGSQ ESGNADDEEE 780
  781 EQQHDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle