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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Nrg-PB, Nrg-PE, ...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRQSTILAA LLVALLCAGS AESKGNRPPR ITKQPAPGEL LFKVAQQNKE SDNPFIIECE  60
   61 ADGQPEPEYS WIKNGKKFDW QAYDNRMLRQ PGRGTLVITI PKDEDRGHYQ CFASNEFGTA 120
  121 TSNSVYVRKA ELNAFKDEAA KTLEAVEGEP FMLKCAAPDG FPSPTVNWMI QESIDGSIKS 180
  181 INNSRMTLDP EGNLWFSNVT REDASSDFYY ACSATSVFRS EYKIGNKVLL DVKQMGVSAS 240
  241 QNKHPPVRQY VSRRQSLALR GKRMELFCIY GGTPLPQTVW SKDGQRIQWS DRITQGHYGK 300
  301 SLVIRQTNFD DAGTYTCDVS NGVGNAQSFS IILNVNSVPY FTKEPEIATA AEDEEVVFEC 360
  361 RAAGVPEPKI SWIHNGKPIE QSTPNPRRTV TDNTIRIINL VKGDTGNYGC NATNSLGYVY 420
  421 KDVYLNVQAE PPTISEAPAA VSTVDGRNVT IKCRVNGSPK PLVKWLRASN WLTGGRYNVQ 480
  481 ANGDLEIQDV TFSDAGKYTC YAQNKFGEIQ ADGSLVVKEH TRITQEPQNY EVAAGQSATF 540
  541 RCNEAHDDTL EIEIDWWKDG QSIDFEAQPR FVKTNDNSLT IAKTMELDSG EYTCVARTRL 600
  601 DEATARANLI VQDVPNAPKL TGITCQADKA EIHWEQQGDN RSPILHYTIQ FNTSFTPASW 660
  661 DAAYEKVPNT DSSFVVQMSP WANYTFRVIA FNKIGASPPS AHSDSCTTQP DVPFKNPDNV 720
  721 VGQGTEPNNL VISWTPMPEI EHNAPNFHYY VSWKRDIPAA AWENNNIFDW RQNNIVIADQ 780
  781 PTFVKYLIKV VAINDRGESN VAAEEVVGYS GEDRPLDAPT NFTMRQITSS TSGYMAWTPV 840
  841 SEESVRGHFK GYKIQTWTEN EGEEGLREIH VKGDTHNALV TQFKPDSKNY ARILAYNGRF 900
  901 NGPPSAVIDF DTPEGVPSPV QGLDAYPLGS SAFMLHWKKP LYPNGKLTGY KIYYEEVKES 960
  961 YVGERREYDP HITDPRVTRM KMAGLKPNSK YRISITATTK MGEGSEHYIE KTTLKDAVNV1020
 1021 APATPSFSWE QLPSDNGLAK FRINWLPSTE GHPGTHFFTM HRIKGETQWI RENEEKNSDY1080
 1081 QEVGGLDPET AYEFRVVSVD GHFNTESATQ EIDTNTVEGP IMVANETVAN AGWFIGMMLA1140
 1141 LAFIIILFII ICIIRRNRGG KYDVHDRELA NGRRDYPEEG GFHEYSQPLD NKSAGRQSVS1200
 1201 SANKPGVESD TDSMAEYGDG DTGQFTEDGS FIGQYVPGKL QPPVSPQPLN NSAAAHQAAP1260
 1261 TAGGSGAAGS AAAAGASGGA SSAGGAAASN GGAAAGAVAT YV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle