YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Gr10b-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVGKLCRLA LRFWMGLILV LGFSSHYYNP TRRRLVYSRI LQTYDWLLMV INLGAFYLYY  60
   61 RYAMTYFLEG MFRRQGFVNQ VSTCNVFQQL LMAVTGTWLH FLFERHVCQT YNELSRILKH 120
  121 DLKLKEHSRF YCLAFLAKVY NFFHNFNFAL SAIMHWGLRP FNVWDLLANL YFVYNSLARD 180
  181 AILVAYVLLL LNLSEALRLN GQQEHDTYSD LMKQLRRRER LLRIGRRVHR MFAWLVAIAL 240
  241 IYLVFFNTAT IYLGYTMFIQ KHDALGLRGR GLKMLLTVVS FLVILWDVVL LQVICEKLLA 300
  301 EENKICDCPE DVASSRTTYR QWEMSALRRA ITRSSPENNV LGMFRMDMRC AFALISCSLS 360
  361 YGIIIIQIGY IPG

Type	Start	End	Confidence
Cytoplasmic	1	8	0.90
Transmembrane Helix	9	28	0.93
Non-Cytoplasmic	29	42	0.82
Transmembrane Helix	43	64	0.87
Cytoplasmic	65	133	0.81
Transmembrane Helix	134	158	0.66
Non-Cytoplasmic	159	170	0.76
Transmembrane Helix	171	193	0.72
Cytoplasmic	194	230	0.94
Transmembrane Helix	231	253	0.91
Non-Cytoplasmic	254	271	0.90
Transmembrane Helix	272	294	0.87
Cytoplasmic	295	349	0.98
Transmembrane Helix	350	371	0.93
Non-Cytoplasmic	372	373	0.93