YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIM23_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWLFTRNKE EEPTSKIDSS ELQVPTEATA SDILSGSEFD PAKLHPLADL DKPLDYLLIE  60
   61 EDALSTLPGD SMAIPSRGWQ DDLCYGTGTS YLSGLAIGGL WGLNEGMKKT KDITSTRLRL 120
  121 NGILNGVTRR GPFVGNSLGV LALVYNGINS LIGYKRQKHG WENSVAAGAL TGALYKSTRG 180
  181 LRAMAISSSL VATAAGIWTL AKRSFTKRLN

Type	Start	End	Confidence
Cytoplasmic	1	132	0.67
Transmembrane Helix	133	152	0.59
Non-Cytoplasmic	153	179	0.66
Transmembrane Helix	180	201	0.86
Cytoplasmic	202	210	0.71