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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gyp51
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFTEANERE VQSSYEKENV KIIREEEAKD QESTDDIAVE DGTGTSPDLN FFSTQNVMQM  60
   61 NFEDEYSEFS NEDDEAEIDN SFADSIPNEP EIPDMQDEYS RDSHSQQSVE EQNNTTNTDE 120
  121 DASVNEFSVA ADISDVNTLG KDNSESTEEP VNEVNETATL GNEDVGERSG FPSEGLDNEP 180
  181 ESQRDLDETG NLAPEDLKDE VKSVHEFNEP NDLRQQEESY SDDDDTNVNE FEDVNEIENE 240
  241 HQLSVADEDQ TSRLVKGKMI FVGKEDFGEE ADISNSVFIE QNGPNSDTVS GFKETSSIVN 300
  301 SSSTTEKPGV ALDSQNDTSI FNEEQTNSLT ETFNDLTLDH LPENVESEPV AGKENETAKN 360
  361 ESGASDNDHK ANVHVFVLKS SEDAITLNEE KIATQDDPLE APTPIVASSS TIFLNSNQRN 420
  421 DELSASGSQE PHPKDGTNST SSLPLDTNNL SNSEPPSHVL DASSETIEVI QTIKKLQNQV 480
  481 PETIKDEVGK KNTAFSPGTS LSTNHVKTKS RSAHNNSTSP FSTAVSSWLN PLRYPSDKSP 540
  541 RVISSYLESV FISKPRSIGD AQKLEILEYL QSQSSTVSNQ VFTLLSNFIQ NPLFVLDECF 600
  601 DEFRNLILMH NSHTVHTVVW KTISSWTSYD YEMQYSSLSI KNCDSDKAIR KDLDRTFAPE 660
  661 ILSHFFSNRQ QLEPTDNIAE STANLHRVLR SLAIVLPQVG YTQGMSWIAG ALLMHLPAPQ 720
  721 AFALLVFLFK NYHLQNIFSS EMRGLSRVLH QFTRLVEDYM PSLAIHFKRQ DIKTCSYASE 780
  781 WFLTLFAYKF PLEVVAHLYD ILFLYGPGIL FNFGLALLSH SQESLLKLNM DRLISYLKED 840
  841 IFLAFKETQE GENYDTSLFV KTAFSFEIQP DVLDRYGNEY DILLKSEHEL DSSLEEMRNR 900
  901 HKSLNEHFIM LSDSMANLQV EHENMSALLL KEKMYLKNQT VEQASLKSEI ASLNSQLAKQ 960
  961 KSEIEQAFQG DMEAIIAENL EIMVESQSLE DEIFRKEKQL AETKVNLAVL DEDHMMALQK1020
 1021 WSQLMNRIKT K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle