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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC5D6.07c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKLSSLLNP IISKILEIYV YSWYSGISKD ALFPSQCEQV GGSIVHELEK RLSRQDAMDL  60
   61 LFYEIPFLLI KHIENTEEAK LRFALPQGQI LEIDTIYHSL HPHIALEKEE NELVYCRLLV 120
  121 EDILKYLLPA TNSKSEIECV ILREALAVQI HKSIQVASSP ETMYKFIIYL SKAILQPSRR 180
  181 PWKESITTAV RWVWHAFRIL LITRGVPYFS TAWFQFYLKL FSQKDNVSSS DLTRWFFFYT 240
  241 LLYPWIALVS AFVAETMTLC CIVTIFYDKN VNRQWKQYIL TSVSNMDKGN PSGGSQSTNV 300
  301 TTFRRFSQSS YPRRSNYRRR ISTSSKSLYE LSPSKFKSIP ITSNPPPMLN LSKGSTSVEP 360
  361 TFCETNASVA LSTVTSTPVF STDSSPLSSR TRENLLSLIP SAVSSPTKAN TNKSHQRSFS 420
  421 IPKATKDSQT PSENSAATLK QAAIDAYSQI PVIPFFLPSD KLIMLVESEY RNKHIFYSLL 480
  481 NSFTMVMFPE LRHTK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle