YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YEPC_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIIALPLPN QRVFLHCYPS EYLAKKVTIH DKIINRIYKY WDSWSASKSY TKQKVVSLGN  60
   61 RILHATPYEE NFLRAIAPVK KLNDTELHQT LYIEHPPNLE SSTILAELNR SKQLQKTHTN 120
  121 YLIGNIIGLP LTIPFILIPL IPNIPGFYLC YRAYCNFRAI QGSIQLARVM SIENIQMQES 180
  181 EKLEKALKLF TNGDATPLNA LIGHPDFVDR YKRAVAQEQR KSKIIK

Type	Start	End	Confidence
Cytoplasmic	1	118	0.70
Transmembrane Helix	119	138	0.71
Non-Cytoplasmic	139	226	0.85