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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YH7H_SCHPO
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGKSKNRAH KNIRARSCLR CRRRKVKCDR QYPCSRCKES EESCTYGVNE QAVQLLEEPL  60
   61 SRPITRETDS SAHQETRTRL EENNLPKTQK FGFVDWKTIL KSSAEFQGIV QRDPESRLRE 120
  121 ALETDPKLKK RLECILETIP PWDVCESLLK VYANTFNVTN YILDFEQADK LLSDLKNSNH 180
  181 VFATSIILIV TAIAVALSLE SFPSNIERYF SAVNHSAIEL SDALNSKIDD FLNEEVIFRL 240
  241 WRNIDRIRLH AIRAQLCMRN QFRSMNTDLC YAIHYACFVN PIFQNTDTEY EANMEVWLSI 300
  301 CEIDALECVL RSCQPWVQHD IYGKLLSQRK MGSDVISYEF HSLLGQLLTC GLEIYKAIHT 360
  361 STVNEFVNSI QFYESQLSLV LMEIESKFSN IDGSDIHFRY LFLKTVFWTV RKNLYQGFIT 420
  421 VSRTLVPNYP DIVQKLGQTS IQLSRLISNS MDCFEKYGWL KAMLILVTHT FLIIHVCSER 480
  481 GYDVPKDFWN VTASVQATLE EKKYPGIVWE RIHYVLNIYT TINSVEPELS EDHGDLDDQN 540
  541 LFQVFTDIFD FNFNFPLPNL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle