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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC2C4.17c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.26
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEHRREPHR RSGYQDDSAF TNTEKLVDEL DHNVEPEQLL EKNRTDFKLM YVIVKFYRWF  60
   61 NNLSFITRWI TIWFPLAGAL VIPLAVGVSP YPNAKLGGVR IFWIFVWLEV AWGGFWVSRV 120
  121 IARLLPYILY PLMGILPFTM YKYTVILTAL EMPLAIFFCS IVCVCTFSPI MIGKGNFTST 180
  181 TVTTTTSATA TPTASASSNA VESVFVTKTA ASVPSWIKVI TKILGAAVVT SIVLLLEKIF 240
  241 LHFIGFHYHE VQYQYRITDN KRNTAVLAKL LTAALDAPYH DSPRVRRQDY LLGLIDTRSM 300
  301 SESKGSGNGK LRKVKKISKN AKRIFSKTRN AISTAFTDML GKHAKDLTPE QEFILETIRS 360
  361 KKKCLALARK IWYSLVPEGE DCFQKEDLIG LIPDDEINDI FHILDNDYSR TVTLDEMEQF 420
  421 TREISIEFRS ISSSLRDVDL ALGKLDRVGL GVVGIIAVLT FISFLDTSFA TILAAFGTTL 480
  481 LSLSFVFSTS AQELMSSIIF LFSKHPFDIS DVVIVNNIKY EVVSLSLLFT VFRTMGGSTV 540
  541 QAPNSLLNTL FIENLRRSQP QSETITIVSP FATDFKQLER LRDLLLTFVK ENERDFRPII 600
  601 DLNVSDFSTL DSLKFTVTYY YKSNWQNVSL QCVRRNKFMC ALKNAIATTN LPAVADPVRG 660
  661 SPDYPFVIEQ YNLERPEYSK TASRPQFSDI SSTASSNSLS NKPGFAHSES RNYHTHDEDN 720
  721 SSDDNHKRED RGHLPAQYLR QSVATWQIPN LISAIEAYDS QNESSQENAT YTVVESNGNA 780
  781 NGDNTATNSQ GATDNGQTTT NTTQNNVDNT QATTDNTQAN TDNMQVAIDY SQNMDGQIQY 840
  841 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle