YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPO7_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSYVPNTLS VYHNLLILEA SFRKTYLQLQ VRRQKYMAFY VSLLVWNFYF GYRVFYRISK  60
   61 YSLIDLTYKL CLLCGIVTLL LFYFSGLYRT TIVYPSRYVQ QVNKAMRFFN IRLVITPVPW 120
  121 FQVRKPLDCG VHLILSSKRF DILVIEGWEA FRSSYFASIH RKNNSIQSNE SSESPSSKQN 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	35	0.71
Transmembrane Helix	36	56	0.85
Non-Cytoplasmic	57	65	0.63
Transmembrane Helix	66	87	0.92
Cytoplasmic	88	180	0.68