YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPBPB8B6.05c
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWGFIVTCGI FLVLLCQLRL LSKRKSKSTP YNALLPNVTV FAMGGTIAGC ANSSLEIVNY  60
   61 IPGSVGIEKL IEAVPAIKAI ANINGVQVTN MGSENLTPAD VLKLAKLILA EVAKPNVHGI 120
  121 VITHGTDSLE ETAMFLDLTI STAKPIVVVG AMRPSTAIGA DGPMNLLNAV AVASSNQSMG 180
  181 RGTLVLLNDR IGSAFYTTKT NGNTLDTFKS YEAGSLGIVL NQKPFYFFSP AVPTGKVFFD 240
  241 IYNIKQLPRV DILYGYQGLN PKLAESAVHL GAKGLVLAAM GATSWTDDGN EVISSLIREH 300
  301 NIPVVYSHRT AEGYSSNSCL GIPSYFLNPQ KARYMLMLAI SSGYSIRDIE GLFSIK

Type	Start	End	Confidence
Signal Peptide	1	22	0.83
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	356	0.98