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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25395867
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTVISLIS HSITTVFYLV PLIIALIIPF SLYSGFRRKS KTVAFFHPYC NAGGGGERVL  60
   61 WAAIRTMQKK FPDHKYFVYS GDTDATKEQI LLKARQRFGI ELDPSNIQFI YLHWRTLVEA 120
  121 RHYKHCTMLF QALAGLILAL EAWFRMVPAV FIDSMGYPLS LPAFRLSGSK VVAYVHYPTI 180
  181 SCDMLDVVES RQETFNNSST IAQSNVLSWG KLTYYRLFAC LYWLAGKAAH VGMVNGSWTQ 240
  241 RHITSIWSRR DVSIVYPPCD VEAFLNIESV AESLLEDTKT VRLLSVGQIR PEKNHKLQLE 300
  301 VLHDVKEPLE KMGYNVELCI AGGCRNEEDQ ERVKMLKNEA EKLDISEQLI WQLNVPYEDL 360
  361 VVELSKALIS IHTMHNEHFG ISVVEAMAAS TIILSNDSGG PRMDIVKDYE GHCVGYLSIT 420
  421 KEEYVETILK IVEEGLKKRN DTRKYARKSL TRFGEAAFEV SRFGKLLKAK NGIFFNRKWK 480
  481 KLTGTKKSKK CCEHFQFQIN HIFSRFLYFL YGFLLYNTMK LYSILVFHKN VDTSDVKLFK 540
  541 SECDLSSFSF FQRGSVQEFM TFTAKLLVER SGLGARSSVK ENEYLVHCYV RNDGLSAVCV 600
  601 TDAEYQQRVA MSFLGRVLDD FTTRVPATQW PGIRSDKDCS YTGLKDLLEK WQNPREADPM 660
  661 TRVQEEVEET KMVMHNTIQS VLDRGEKLDD LVKKSENLSD QSKMFYTSAR KMNKCCNYV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle