YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE02007
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLCFILLTH DVQSLVFFYN LPNLTFLPIE TFFCEFSIFF FLNLFFPFFP LFSPAFSFDF  60
   61 QLKMVQIWQM EPYPCGDPRL PHHLFPPKKI TPDELSKRTG TLYWKLDTLD QVALAKRLTT 120
  121 LKLEHSFKKE DIFTLDAETT ANFDDKIEEL FEESSVPFEQ ARMIIEGTAY YDVEDKNGQW 180
  181 VRIFCEYGDL ILIPANTCFR FTTTPHNFVK MRRFYKDEDS E

Type	Start	End	Confidence
Cytoplasmic	1	30	0.57
Transmembrane Helix	31	52	0.77
Non-Cytoplasmic	53	221	0.64