YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	cyp-14A1
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVFILAFVI FIIFYVFHFY WKVSKYPKGP LPLPFIGNIH QFPPDNVQKY FDVLSKTYGP  60
   61 CFTIWIPFPA IVLTDYEHIK DAFVNQGDTF TYRAHRSPET LLPVHDHTGI LASDGDHWRL 120
  121 QRRTSLKILR DFGLGRNLME EQVIRSVHEM LIQLENINDK KNVDVFWPIQ LCVGNVINET 180
  181 LFGFHYKYED SEKFKTFVKI VDKHLRHLQG KMPLLVSAFP WLKHVPIVGD IGYHNIKNNI 240
  241 SSYHTFIEEE VATQVKKYDG ESEPENFVHA YMQQMKQTGN PGLDITNLCA TVLDFWLAGM 300
  301 ETTSNSLRWH LAFMMKYPEV QDKVRKEILD NVGTARLPSM SDKPNMPYTQ AVIHEVQRCS 360
  361 NMIPFLGSHQ CKEETEIHGN RVPAGSLVFA QLWSVMRNDT VFEDPETFNP SRYLQSDGKT 420
  421 FDKAVLEKTI PFSIGKRNCV GEGLARMELF LIFSALIQKY EFVATSNIDL TPDWGVVLTA 480
  481 KPYTCNIIPQ F

Type	Start	End	Confidence
Cytoplasmic	1	2	0.60
Transmembrane Helix	3	21	0.75
Non-Cytoplasmic	22	491	0.81