YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	dsl-5
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLLAISFLF ITFIIESIIC SGYLELHIQS PHIQTAIVNI SSNFRTEKSK IVHLKLKSNV  60
   61 PFNVTRIPVN FDNIYNITIK CGKSEEDGKF NSYFKNSTPK YLGLTDTTIV STVHPRVGLL 120
  121 SPAAVARPLN GIRIVIGCNK NWFGEKCETF CDENKATNSG KHCNFQGKPS CLNGLTGSKC 180
  181 EKLIVPKLCN CENGGVCIDS NPKPICECSK AYRGEKCEKK HISASLSSHY KGDFWNFRMT 240
  241 FWQLIFSNLV ENELAEISKS EAWETINNLL GNVSDTPFAN RPNNTETFPI TGSVNLDNVD 300
  301 II

Type	Start	End	Confidence
Signal Peptide	1	20	0.60
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	302	0.96