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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: twk-22
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVPTFILHS ADTESVISDD DSSYYFDGSV EQLTLRNQEY SDDNRMQRRA PIRRKSALDD  60
   61 DQTSQAMKLL EKYIRKKYRH SVIFSQDSAD IEQSSTPVGH TQSACQFSRN LTPEQRNGFY 120
  121 STPLGPAPSE YHFPPGSPQF RESTIREEFK QQYRETWGHW FVRVGKFLYK LLGIQYMLLA 180
  181 LMILGYACLG GYIFLTLEYD QQQLDLEVEK QVRLSESTLL AENLLKYLKQ WNCGQSNENR 240
  241 CLELITKAFI ERSIKVERDI RGEGWRYGNL ACKTNLGRVA TIIYGLIGIP LMLFVLKIFG 300
  301 EHSIKWAQKV RYSIRRCVKR CFRRSKLKRA STIESVASDE MPCEESGISE DEEQITTFPV 360
  361 KWALFIVFFF MVVCSLIVSF WEKWDFLTAF YFFFVSLSTI GFGDVIPEHP RTACGNGLLE 420
  421 IKICYISVMI NGALKMSGDA VNFPRFLNTK IQLTEKFQLY LISALFVLYF VGLALFSMVY 480
  481 AILQERVENQ YMWALELIDQ EYQENQKQDP DDHLEIPTIL PENAAGMEGW TNTIGKMVSQ 540
  541 NPVRWRAKNS AYSMENMPDR PISERRFSVL SPGEAPQAPP PVLGTFMLHS LSVKKKLLAR 600
  601 SESILNRTGS PWPHAAEMNR PKEATRLGEP SALRVSAPNL TISGGNRSPS GGALSVITEA 660
  661 SDEDTRHFKK HRRPLAKTVS TDGTVSNHGS AESLDQVMDE LQLESHDQAV TPKPYRDPTT 720
  721 STRFRKRDET VVSRAEKMPL SPNEVLEEED EDENGDT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle