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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE13066
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLSVSNGTD QNPQDLNDLQ WNAFHAFLLL LIILVVFGNT MVIFAVAVDR KLRSVTTNKF  60
   61 IASLAVSDLL VGLIVMPLSL YYKMHNDHWT LGYTWCQFHL VSGVFSTTAS IVHLVAISLD 120
  121 RYFAIMFPTE YQRHSVSTST VPYVVMIWLM ALAVSSTLFM EQRDSFDGIC WISNPQYIVL 180
  181 SSFLSFFLPG AIVVYLYMKI FKKLRNHQLY MFGQLTHRGG ERERRHSLPR VIIEEVRSRR 240
  241 GSRMSQTGSQ SGSPTRRQSG GSKERSPSQP DIHIVAKPQQ RWRSPTICAE TLAHDRLLAA 300
  301 KKRVSIVPDP PSMDVSVNMA SIDQMKDEHH HNLMREEELL GCEAGRRKQS EEEVRKLSDE 360
  361 RKRVIYERRR SSTSENPNGI PIMQAFQKAY QEVRAGRRRS TIHDITAYHF PSLTTVNEPA 420
  421 TPPPGEDCEE KEKDSDGTSI MHKLSSGSSI AETVIAMLPK TSTLSKTDSH ESSVSTEASQ 480
  481 KPLLGPPTHH YTKKSQTQKE PRYSPSIPAP TFLMVPAMMA VNTPPATPNT KEAPTNCTSL 540
  541 LQVPRLFDCP SPCSVPSNSS HSSYTSASGS SDTYRRISMN SYGSSLTDGT ESTFECDSRR 600
  601 SSAWSTIRAA VFDRQQMRGG KASVDITVDR TGSPQKKMST ISRGKLRRIA TQVTRAIRRK 660
  661 RRESMAIRRE SRATRVVAAI LIAFLICWIP YFCISIFRGV LMGFQININT PIHLTLFVYT 720
  721 SWLGYAHSCF NPLIYMCLNK NFRNTMRKMM QKTNRAKMAE QEG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle