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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7507040
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTLPPVLNS SYVGIHGNST FINFEFSFYT LPMLFLLVPI LYIPITIIII LRILVKLYYA  60
   61 FRDRNNNVYL LSAISISQCM CLLFFLADFL YLRLPTSGLL TSWCASIEPN RFITILTIFT 120
  121 YHINYSTMIF PFLVSIMRLI LIISPKNHKK FNGQLLRFSI PFICVYPIIF TFFMFPAIGY 180
  181 CSYAAYPFPF GAIIFRIERT FFGLVNNFSL LFNTLFWMTC CIITNFILLL LLIKSRCLLN 240
  241 AQTRSMHSYK VEVSLSLTTF SMIFSYLSNA MIVICSFFFW NYTSLAIMLR PFGNDLDTCV 300
  301 APWVFYLTHP VFRKKACVTT HSNYCFCFFF RFSLNFEIFC VSKGHYSFNE YQQFPSRPQK 360
  361 RLVDPPIVDL DEEPPIVDLD DSFDNFHVGS TSEEVVSGDI APEEEEEEGH DSFDDFESVP 420
  421 AQPPSKNTLA SLQKSDSEIA LNQQRHDMHG RFRGFLQDDS EEFSDEVGLL GADMNKELYD 480
  481 TLKSKFGFNQ FRHRQKQCIL STLMGHDTFV LMPTGAGKSL CYQLPAVILP GVTVVVSPLR 540
  541 SLIEDQKMKM KELGIGCEAL TADLGAPAQE KIYAELGSGN PSIKLLYVTP EKISASGRLN 600
  601 SVFFDLHRRG LLARFVIDEA HCVSQWGHDF RPDYTKLSSL REKYANPPVP IIALTATATP 660
  661 KIVTDARDHL KMQNSKLFIS SFVRDNLKYD LIPKAARSLI NVVEKMKQLY PGKSGIVYCL 720
  721 SRKECETVQM MLTKAGLSAE VYHAGLNDNL RVSVQRSWIA NKFDVICATI AFGMGIDKPD 780
  781 VRFVIHYSLP KSIEGYYQET GRAGRDGMPS YCLMLYSYHD SIRLRRMIEE GNTTTGVRSM 840
  841 HLNNVLQVVA YCENVSVCRR KMLVEHFGEV YDEQSCRNSK TPCDICERQR KNAEAIRLFD 900
  901 VSTDALSILK CLPRMQKATL KYISELYRGA LIKKSQEQAM RLGHTKLPFY SKGQGMSEQD 960
  961 ALRFVRKLVI EGYIHERLYS VPNQAAAVFA YAELTEAGRD LANGKKTAKV YLHIVTCERK1020
 1021 RKNAGLIELS NMNIVSEAQA LKERHMVKHG DVFTRCLQDL THLITAVAES SGLSGPYSIV1080
 1081 SREGIEQIAA LLPRTNSDLL RIDSMTQIKV TKYGRLIMEL LATYWKQVDE REEEEMRNQL1140
 1141 DKLKSGEIVM GGFATLQSDP GFPSVPYMKP LGGGGGCRGR GKKRAFSGFS SGRATKKPRA1200
 1201 TAPSARGKTS GRGGAKPATS LKRNMYPATS M

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle