YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|134054480
Protein type: Globular with Signal Peptide
Type Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPLCLLLYL ATLVFPPVYS AHLLSPEPTD WVSSEVEVFL EDYVAGVGDT VVLSCTPQDF  60
   61 LLPIVWQKDG DAVSSSNRTR VGQKALRIIN VSYEDSGVYS CRHAHKSMLL SNYTVKVIDS 120
  121 LSSGDDEDYD EDEDEAGNGN AEAPYWTRSD RMEKKLLAVP AANTVKFRCP AAGNPTPSIH 180
  181 WLKNGKEFKG EQRMGGIKLR DQQWSLVMES AVPSDRGNYT CVVQNKYGSI KHTYQLDVLE 240
  241 RSPHRPILQA GLPANQTVVV GSDVEFHCKV YSDAQPHIQW LKHIEVNGSQ YGPNGAPYVN 300
  301 VLKTAGINTT DKELEILYLT NVSFEDAGQY TCLAGNSIGY NHHSAWLTVL PAVEMEREDD 360
  361 YADILIYVTS CVLFILTMVI IILCRMWINT QKTLPAPPVQ KLSKFPLKRQ VTVSLESNSS 420
  421 MNSNTPLVRI ARLSSSDGPM LPNVSELELP SDPKWEFTRT KLTLGKPLGE GCFGQVVMAE 480
  481 AIGIDKEKPN KPLTVAVKML KDDGTDKDLS DLVSEMEMMK MIGKHKNIIN LLGACTQDGP 540
  541 LYVLVEYASK GNLREYLRAR RPPGMDYSFD TCKIPNETLT FKDLVSCAYQ VARGMEYLAS 600
  601 KKCIHRDLAA RNVLVTEDNV MKIADFGLAR DVHNIDYYKK TTNGRLPVKW MAPEALFDRV 660
  661 YTHQSDVWSY GVLLWEIFTL GGSPYPGIPV EELFKLLKEG HRMDKPANCT HELYMIMREC 720
  721 WHAVPSQRPT FRQLVEDHDR VLSMTSTDEY LDLSVPFEQY SPTCPDSNST CSSGDDSVFA 780
  781 HDPLPEEPCL PKHHHSNGVI RT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle