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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE16121
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAATTEVDY PYFPFRISID FVLVHNAAES RSKGKYREFF EKAVQKEGLI IRHQQSGQTH  60
   61 FTLISTPFHR LTREAEMSQM CFPLKDCQVK PGLPSCCIPL SQIFVTDDTV RFINAPFQRK 120
  121 HGSLFLNYHD EKSFFTSSQR GYLTYQILTK IDISKDLKGE RLGESQDEPT DPSTSSITSD 180
  181 EQLRRKGLSW LLMSDVYEEA FVLHAPSKEE PYFKAMQNGS VKAYNEFISE IELDPRRSLS 240
  241 LNWERWYKFQ PLNKIRDYFG EQIAYYFAWQ GTFLTLLWPA VIFGLVVFIY GFIDSISSAP 300
  301 LDWNHCKVVN FIGQTENVAC GMRNGVTLFF SMVTQWFMSS FDTKMNAFFA VFMSIWGSVF 360
  361 VQIWKRNNSV LSYQWNSDDF HAIEPDRPEF RGSKVKEDPI TGEDIWISPA LARYIKMLAS 420
  421 FVFVSFSMLV VVISLMLVTL LKIWMVYNFQ CTKEYTFHCW LSAAFLPSIL NTLSAMGLGA 480
  481 IYSNLVSRLN SWENHRTESE HNNSLIVKIF AFQMVNTYTS LFYVAFIRPE SHGLQPNGLF 540
  541 GLGTEFKDTC LDDTCSSLLA LQLLTHTLIK PFPKFFKDVV LPYFVKLFRL RMYTSRTEAR 600
  601 VEIEDDDQAN VLMFASLFPL APLLALIIGF VDMRIDAHRL IWFNRKPIPI ITNGIGIWLP 660
  661 ILTFLQYCAV FTNAFIVAFT SGFCSTFLAD GAYCTVQNRL IIVIVFQNLV FGLKYLLSSV 720
  721 IPSIPASIKL ALRKKRYVVA HIVEKGDVPH RTRIKKRTRI AKLAWIASNQ KMIKSNRKKE 780
  781 KSNKKHFTVA EYIILVHFII ITKIINEFKF SLSQPRMRRS FQLVLLLTTV VSSVLSKIDH 840
  841 VKEKTGETHS DPAKLKTKEA PEHIDHKKLF TESFKQRRIE HTTAIESIKK IGKDKRRLFL 900
  901 EDVLKNVQNL LKESREALER TAHRSDSPFP HGSELLKDAL SKLHENIAFF TDLSLAFSKF 960
  961 FETKIQKDRK LKTLIVWAYN YSIKTGIFDE ETEKKVQLMA QQHEFIEKNE KFFNSYDKDR1020
 1021 VKEDLEAEEM KRKEKKSNKA EKKQPKGEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle