YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7494996
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHGLKRSLMI RTVCRGKATT AGADLPQSSQ EIEVTTPKSE NVPAKSANAS TVYRPPYYRK  60
   61 PHQHHEPKHM LQEEFVNAGD ASGAGVRVFD YYKTAEMVHS MPTIKEKIDF VSPYERPWTR 120
  121 AEKTWRRDWH PTLMATRKAW GIPPTPAHFD TLDYYKYLTK TRVENESLDD FYHGLRPPTA 180
  181 DLQTSFQNTL KSMEFGDGIN FSDEDTQKLF GSLIDDAMGG IAHNVSRLAD HRVAYDVESE 240
  241 AFWVRSGFMF LYDEEEIGTR DVKRRLNNFP KFIGDDRRKL GELAFVHRDK LAAQVRSKEP 300
  301 SAPLHSFDSE DAKLPIFDTN YNFEETLFSP KVYNLWPDQE PLWQCPGYHA DSGESHTYGI 360
  361 LGVKSLRPLR KRIAHWMGWE NENELESSEE AKQMLDDGAR SQAIISMFTT LCAQAHTHGF 420
  421 TQYTDITRSF TSQLVLSDGI NFWFAIGQLN TIAINVECDG FVNPRTNYIR IDGPYRLFDY 480
  481 CDKNGQYLSV QEEIDAENKV QRKIAPGLNE KVLERVTQML MKQEKSTETY MIWLKNLRVP 540
  541 ILLAIILVVY NEYFIFFIAF SSCQWPCKYG RCSESSVKAF MISDTHLLGK INGHWLDKLK 600
  601 REWQMYQSFW ISTWIHSPDV TFFLGDLMDE GKWAGRPVFE AYAERFKKLF GDNEKVITLA 660
  661 GNHDLGFHYA LVQTFATHLT PTVELKNYLL IMPETLEMFK KEFRRGLIDE MKIKKHRFVL 720
  721 INSMAMHGDG CRLCHEAELI LEKIKSRNPK NRPIVLQHFP LYRKSDAECD QVDEQHEIDL 780
  781 KEMYREQWDT LSKESSLQII DSLNPKAVFG GHTHKMCKKK WNKTGNSEYF YEYTVNSFSW 840
  841 RNGDVPAMLL VVIDGDNVLV SSCRLPSEIL QIMVYIFGGI GILAKMYNDL ITPAPLEWNV 900
  901 NNIAVCTAII LVMIINVVAL IFTIFWCLRS KDEGGEIDSN GVVINQFVEP NIRMKFKMPK 960
  961 IRGDAIHDSS QDVFELRVPR NGNQFDACHE QTVIVARNKR SRTYSVPLES RPRTQSTGSE1020
 1021 QIP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle